Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Lsm3P62311 Gm16202-201ENSMUST00000117532 544 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Gm15693-201ENSMUST00000120470 637 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Gm25911-201ENSMUST00000157621 56 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Gm25144-201ENSMUST00000179561 110 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Gm25352-201ENSMUST00000179815 110 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Gm19078-201ENSMUST00000206311 727 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm3P62311 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm3P62311 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.13□□□□□ -0.63
Lsm3P62311 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lsm3P62311 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lsm3P62311 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lsm3P62311 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lsm3P62311 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Lsm3P62311 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm3P62311 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm3P62311 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Lsm3P62311 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm3P62311 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm3P62311 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm3P62311 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm4875-201ENSMUST00000118257 786 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.12□□□□□ -0.63
Lsm3P62311 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm38294-201ENSMUST00000192831 381 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Lsm3P62311 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm3P62311 Mzt1-203ENSMUST00000227948 952 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Lsm3P62311 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm3P62311 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Lsm3P62311 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.12□□□□□ -0.63
Lsm3P62311 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm3P62311 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.11□□□□□ -0.63
Lsm3P62311 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Lsm3P62311 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lsm3P62311 Gm14350-201ENSMUST00000116642 640 ntBASIC11.11□□□□□ -0.63
Lsm3P62311 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm3P62311 Gm11779-201ENSMUST00000118541 368 ntBASIC11.11□□□□□ -0.63
Lsm3P62311 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms