Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Sec61a1P61620 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Gm35960-201ENSMUST00000202712 767 ntBASIC10.83□□□□□ -0.68
Sec61a1P61620 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a1P61620 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a1P61620 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.82□□□□□ -0.68
Sec61a1P61620 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.82□□□□□ -0.68
Sec61a1P61620 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.82□□□□□ -0.68
Sec61a1P61620 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gm16479-201ENSMUST00000121706 932 ntBASIC10.82□□□□□ -0.68
Sec61a1P61620 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gm19184-201ENSMUST00000196798 928 ntBASIC10.82□□□□□ -0.68
Sec61a1P61620 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.82□□□□□ -0.68
Sec61a1P61620 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a1P61620 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Sec61a1P61620 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Gm22018-201ENSMUST00000104357 131 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.81□□□□□ -0.68
Sec61a1P61620 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a1P61620 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.81□□□□□ -0.68
Sec61a1P61620 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a1P61620 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.81□□□□□ -0.68
Sec61a1P61620 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms