Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.59□□□□□ -0.55
Nup43P59235 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.59□□□□□ -0.55
Nup43P59235 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nup43P59235 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nup43P59235 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Nup43P59235 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Nup43P59235 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nup43P59235 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Nup43P59235 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Nup43P59235 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Nup43P59235 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Gm4034-201ENSMUST00000187674 480 ntBASIC11.58□□□□□ -0.56
Nup43P59235 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Thoc7-209ENSMUST00000225325 765 ntBASIC11.58□□□□□ -0.56
Nup43P59235 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.58□□□□□ -0.56
Nup43P59235 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.58□□□□□ -0.56
Nup43P59235 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nup43P59235 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nup43P59235 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Nup43P59235 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.58□□□□□ -0.56
Nup43P59235 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nup43P59235 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.58□□□□□ -0.56
Nup43P59235 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.58□□□□□ -0.56
Nup43P59235 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nup43P59235 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Nup43P59235 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Gm23912-201ENSMUST00000104687 87 ntBASIC11.57□□□□□ -0.56
Nup43P59235 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.57□□□□□ -0.56
Nup43P59235 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Mir6420-201ENSMUST00000185032 102 ntBASIC11.57□□□□□ -0.56
Nup43P59235 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.57□□□□□ -0.56
Nup43P59235 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.57□□□□□ -0.56
Nup43P59235 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.57□□□□□ -0.56
Nup43P59235 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.57□□□□□ -0.56
Nup43P59235 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.57□□□□□ -0.56
Nup43P59235 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nup43P59235 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nup43P59235 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nup43P59235 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nup43P59235 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.57□□□□□ -0.56
Nup43P59235 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.57□□□□□ -0.56
Nup43P59235 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms