Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Gm13351-201ENSMUST00000118087 414 ntBASIC15.31■□□□□ 0.04
Vps33bP59016 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Gm37826-201ENSMUST00000195329 322 ntBASIC15.31■□□□□ 0.04
Vps33bP59016 Gm43912-201ENSMUST00000204352 538 ntBASIC15.31■□□□□ 0.04
Vps33bP59016 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Vps33bP59016 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.31■□□□□ 0.04
Vps33bP59016 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps33bP59016 Gm45856-201ENSMUST00000212752 416 ntBASIC15.31■□□□□ 0.04
Vps33bP59016 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps33bP59016 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps33bP59016 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps33bP59016 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps33bP59016 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps33bP59016 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps33bP59016 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps33bP59016 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps33bP59016 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps33bP59016 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Vps33bP59016 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vps33bP59016 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps33bP59016 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps33bP59016 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vps33bP59016 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps33bP59016 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps33bP59016 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps33bP59016 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.3■□□□□ 0.04
Vps33bP59016 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm18561-201ENSMUST00000206027 804 ntBASIC15.3■□□□□ 0.04
Vps33bP59016 Gm17931-201ENSMUST00000208132 634 ntBASIC15.3■□□□□ 0.04
Vps33bP59016 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm30671-201ENSMUST00000214898 318 ntBASIC15.3■□□□□ 0.04
Vps33bP59016 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.3■□□□□ 0.04
Vps33bP59016 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps33bP59016 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps33bP59016 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps33bP59016 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps33bP59016 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps33bP59016 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps33bP59016 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps33bP59016 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm22379-201ENSMUST00000157480 131 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm22846-201ENSMUST00000157706 270 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm25554-201ENSMUST00000158075 113 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm28937-201ENSMUST00000185413 695 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm29400-201ENSMUST00000187208 695 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm28662-201ENSMUST00000188446 695 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm28251-201ENSMUST00000188835 695 ntBASIC15.29■□□□□ 0.04
Vps33bP59016 Gm28833-201ENSMUST00000189671 559 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms