Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.25□□□□□ -0.29
Nub1P54729 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Gm6754-201ENSMUST00000117124 913 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Gm14723-201ENSMUST00000118686 215 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Gm24845-201ENSMUST00000158034 109 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.25□□□□□ -0.29
Nub1P54729 Gm38266-201ENSMUST00000194931 421 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.25□□□□□ -0.29
Nub1P54729 Gm43179-201ENSMUST00000198797 275 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Gm44124-201ENSMUST00000204159 472 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nub1P54729 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.25□□□□□ -0.29
Nub1P54729 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Nub1P54729 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.24□□□□□ -0.29
Nub1P54729 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.24□□□□□ -0.29
Nub1P54729 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nub1P54729 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nub1P54729 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.24□□□□□ -0.29
Nub1P54729 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.24□□□□□ -0.29
Nub1P54729 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.24□□□□□ -0.29
Nub1P54729 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nub1P54729 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Nub1P54729 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nub1P54729 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nub1P54729 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.24□□□□□ -0.29
Nub1P54729 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.23□□□□□ -0.29
Nub1P54729 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nub1P54729 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nub1P54729 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nub1P54729 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Gm11222-201ENSMUST00000119005 738 ntBASIC13.23□□□□□ -0.29
Nub1P54729 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.23□□□□□ -0.29
Nub1P54729 Gm14832-201ENSMUST00000121289 322 ntBASIC13.23□□□□□ -0.29
Nub1P54729 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nub1P54729 Gm26956-201ENSMUST00000182176 986 ntBASIC13.23□□□□□ -0.29
Nub1P54729 Gm28882-201ENSMUST00000185504 314 ntBASIC13.23□□□□□ -0.29
Nub1P54729 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nub1P54729 Gm43758-201ENSMUST00000199500 367 ntBASIC13.23□□□□□ -0.29
Nub1P54729 Gm21769-201ENSMUST00000211922 111 ntBASIC13.23□□□□□ -0.29
Nub1P54729 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.23□□□□□ -0.29
Nub1P54729 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Nub1P54729 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nub1P54729 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.23□□□□□ -0.29
Nub1P54729 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms