Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Cacnb3P54285 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.27□□□□□ -0.12
Cacnb3P54285 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cacnb3P54285 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cacnb3P54285 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.27□□□□□ -0.12
Cacnb3P54285 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
Cacnb3P54285 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Gm9540-201ENSMUST00000188230 478 ntBASIC14.27□□□□□ -0.13
Cacnb3P54285 Gm2965-201ENSMUST00000198365 343 ntBASIC14.27□□□□□ -0.13
Cacnb3P54285 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cacnb3P54285 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.27□□□□□ -0.13
Cacnb3P54285 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cacnb3P54285 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Cacnb3P54285 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacnb3P54285 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Cacnb3P54285 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm15595-201ENSMUST00000120840 961 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm4726-201ENSMUST00000135604 736 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm6019-201ENSMUST00000148369 736 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm18711-201ENSMUST00000199341 750 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm10752-201ENSMUST00000218348 729 ntBASIC14.26□□□□□ -0.13
Cacnb3P54285 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cacnb3P54285 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacnb3P54285 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Gm11511-201ENSMUST00000118146 540 ntBASIC14.25□□□□□ -0.13
Cacnb3P54285 Gm11956-201ENSMUST00000119525 512 ntBASIC14.25□□□□□ -0.13
Cacnb3P54285 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Gm15881-201ENSMUST00000148792 942 ntBASIC14.25□□□□□ -0.13
Cacnb3P54285 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacnb3P54285 Gm22144-201ENSMUST00000157402 102 ntBASIC14.25□□□□□ -0.13
Cacnb3P54285 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cacnb3P54285 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.25□□□□□ -0.13
Cacnb3P54285 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms