Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox1P53783 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox1P53783 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox1P53783 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox1P53783 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox1P53783 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox1P53783 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox1P53783 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox1P53783 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox1P53783 Gm11560-201ENSMUST00000117567 948 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox1P53783 Gm13117-201ENSMUST00000120894 691 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox1P53783 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox1P53783 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm9625-201ENSMUST00000180422 955 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm29304-201ENSMUST00000186555 695 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Gm29223-201ENSMUST00000188867 695 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Gm18304-201ENSMUST00000189162 546 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Gm9136-201ENSMUST00000193368 454 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Gm37921-201ENSMUST00000194333 695 ntBASIC12.51□□□□□ -0.41
Sox1P53783 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.51□□□□□ -0.41
Sox1P53783 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox1P53783 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Sox1P53783 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox1P53783 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.51□□□□□ -0.41
Sox1P53783 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Sox1P53783 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.51□□□□□ -0.41
Sox1P53783 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox1P53783 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.51□□□□□ -0.41
Sox1P53783 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sox1P53783 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Sox1P53783 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox1P53783 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox1P53783 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Gm22711-201ENSMUST00000116890 133 ntBASIC12.5□□□□□ -0.41
Sox1P53783 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox1P53783 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Gm4462-201ENSMUST00000166453 492 ntBASIC12.5□□□□□ -0.41
Sox1P53783 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.5□□□□□ -0.41
Sox1P53783 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox1P53783 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.5□□□□□ -0.41
Sox1P53783 Gm45085-201ENSMUST00000209100 441 ntBASIC12.5□□□□□ -0.41
Sox1P53783 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox1P53783 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox1P53783 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.5□□□□□ -0.41
Sox1P53783 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms