Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.4□□□□□ -0.42
Lhx3P50481 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx3P50481 Gm11439-201ENSMUST00000118598 409 ntBASIC12.4□□□□□ -0.42
Lhx3P50481 Gm5419-201ENSMUST00000119301 527 ntBASIC12.4□□□□□ -0.42
Lhx3P50481 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx3P50481 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx3P50481 Gm24990-201ENSMUST00000157406 323 ntBASIC12.4□□□□□ -0.42
Lhx3P50481 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.4□□□□□ -0.42
Lhx3P50481 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lhx3P50481 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx3P50481 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx3P50481 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.4□□□□□ -0.42
Lhx3P50481 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx3P50481 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx3P50481 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx3P50481 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx3P50481 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lhx3P50481 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.39□□□□□ -0.43
Lhx3P50481 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lhx3P50481 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Gm5706-201ENSMUST00000181525 993 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm27341-201ENSMUST00000183570 106 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm27627-201ENSMUST00000183644 150 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm29615-201ENSMUST00000185371 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28224-201ENSMUST00000186078 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm29001-201ENSMUST00000186177 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28292-201ENSMUST00000186593 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28101-201ENSMUST00000187608 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm29076-201ENSMUST00000187689 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28302-201ENSMUST00000187931 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28646-201ENSMUST00000188220 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28205-201ENSMUST00000189177 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm29032-201ENSMUST00000189797 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm28695-201ENSMUST00000190300 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Gm37448-201ENSMUST00000192795 697 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.39□□□□□ -0.43
Lhx3P50481 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx3P50481 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx3P50481 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lhx3P50481 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.38□□□□□ -0.43
Lhx3P50481 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.38□□□□□ -0.43
Lhx3P50481 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.38□□□□□ -0.43
Lhx3P50481 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Lhx3P50481 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Gm12380-201ENSMUST00000119012 544 ntBASIC12.38□□□□□ -0.43
Lhx3P50481 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.38□□□□□ -0.43
Lhx3P50481 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.38□□□□□ -0.43
Lhx3P50481 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lhx3P50481 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.38□□□□□ -0.43
Lhx3P50481 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.38□□□□□ -0.43
Lhx3P50481 Gm42599-201ENSMUST00000201308 469 ntBASIC12.38□□□□□ -0.43
Lhx3P50481 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms