Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shmt1P50431 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shmt1P50431 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shmt1P50431 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shmt1P50431 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Gm14028-201ENSMUST00000117434 479 ntBASIC12.96□□□□□ -0.33
Shmt1P50431 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Shmt1P50431 Gm37666-201ENSMUST00000194110 866 ntBASIC12.96□□□□□ -0.33
Shmt1P50431 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.96□□□□□ -0.33
Shmt1P50431 Gm3786-201ENSMUST00000202659 378 ntBASIC12.96□□□□□ -0.33
Shmt1P50431 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.96□□□□□ -0.33
Shmt1P50431 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.96□□□□□ -0.33
Shmt1P50431 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.96□□□□□ -0.33
Shmt1P50431 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shmt1P50431 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.96□□□□□ -0.33
Shmt1P50431 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.96□□□□□ -0.34
Shmt1P50431 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Shmt1P50431 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shmt1P50431 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt1P50431 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.95□□□□□ -0.34
Shmt1P50431 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Shmt1P50431 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Shmt1P50431 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Shmt1P50431 Gm7722-201ENSMUST00000120646 741 ntBASIC12.95□□□□□ -0.34
Shmt1P50431 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt1P50431 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt1P50431 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt1P50431 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.95□□□□□ -0.34
Shmt1P50431 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Shmt1P50431 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shmt1P50431 Rubie-203ENSMUST00000227803 2430 ntBASIC12.94□□□□□ -0.34
Shmt1P50431 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.94□□□□□ -0.34
Shmt1P50431 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt1P50431 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.94□□□□□ -0.34
Shmt1P50431 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Shmt1P50431 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.94□□□□□ -0.34
Shmt1P50431 Gm24749-201ENSMUST00000157838 343 ntBASIC12.94□□□□□ -0.34
Shmt1P50431 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.94□□□□□ -0.34
Shmt1P50431 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Gm43138-201ENSMUST00000199123 708 ntBASIC12.94□□□□□ -0.34
Shmt1P50431 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.94□□□□□ -0.34
Shmt1P50431 Gm17812-201ENSMUST00000204935 318 ntBASIC12.94□□□□□ -0.34
Shmt1P50431 Gm45433-201ENSMUST00000209386 247 ntBASIC12.94□□□□□ -0.34
Shmt1P50431 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt1P50431 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shmt1P50431 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Shmt1P50431 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shmt1P50431 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms