Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.16□□□□□ -0.78
Nkx2-1P50220 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.16□□□□□ -0.78
Nkx2-1P50220 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm24231-201ENSMUST00000104315 133 ntBASIC10.15□□□□□ -0.78
Nkx2-1P50220 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm6152-201ENSMUST00000151704 340 ntBASIC10.15□□□□□ -0.78
Nkx2-1P50220 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.15□□□□□ -0.78
Nkx2-1P50220 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.15□□□□□ -0.78
Nkx2-1P50220 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.15□□□□□ -0.78
Nkx2-1P50220 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx2-1P50220 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Nkx2-1P50220 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm27701-201ENSMUST00000184498 110 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm8515-201ENSMUST00000194852 576 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.14□□□□□ -0.79
Nkx2-1P50220 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nkx2-1P50220 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms