Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.09□□□□□ -0.63
Rfx3P48381 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfx3P48381 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rfx3P48381 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.09□□□□□ -0.63
Rfx3P48381 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rfx3P48381 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Rfx3P48381 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.08□□□□□ -0.64
Rfx3P48381 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.08□□□□□ -0.64
Rfx3P48381 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.08□□□□□ -0.64
Rfx3P48381 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.08□□□□□ -0.64
Rfx3P48381 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rfx3P48381 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfx3P48381 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfx3P48381 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rfx3P48381 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm12502-201ENSMUST00000120197 444 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.07□□□□□ -0.64
Rfx3P48381 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm18584-201ENSMUST00000203098 964 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm5904-201ENSMUST00000210286 865 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfx3P48381 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rfx3P48381 Gm9899-201ENSMUST00000065519 555 ntBASIC11.07□□□□□ -0.64
Rfx3P48381 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rfx3P48381 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rfx3P48381 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.07□□□□□ -0.64
Rfx3P48381 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms