Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LdlrP35951 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LdlrP35951 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LdlrP35951 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LdlrP35951 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
LdlrP35951 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LdlrP35951 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.21□□□□□ -0.45
LdlrP35951 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LdlrP35951 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
LdlrP35951 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Gm13786-201ENSMUST00000122371 333 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.21□□□□□ -0.45
LdlrP35951 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Gm25261-201ENSMUST00000157416 134 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Rmrp-201ENSMUST00000157463 271 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.21□□□□□ -0.45
LdlrP35951 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.21□□□□□ -0.45
LdlrP35951 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.21□□□□□ -0.45
LdlrP35951 Gm29396-201ENSMUST00000185659 716 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.21□□□□□ -0.45
LdlrP35951 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
LdlrP35951 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.21□□□□□ -0.45
LdlrP35951 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
LdlrP35951 Gm24136-201ENSMUST00000083374 165 ntBASIC12.21□□□□□ -0.45
LdlrP35951 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.21□□□□□ -0.45
LdlrP35951 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LdlrP35951 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.21□□□□□ -0.46
LdlrP35951 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
LdlrP35951 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.21□□□□□ -0.46
LdlrP35951 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LdlrP35951 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.21□□□□□ -0.46
LdlrP35951 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.21□□□□□ -0.46
LdlrP35951 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.2□□□□□ -0.46
LdlrP35951 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LdlrP35951 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.2□□□□□ -0.46
LdlrP35951 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.2□□□□□ -0.46
LdlrP35951 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LdlrP35951 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LdlrP35951 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.2□□□□□ -0.46
LdlrP35951 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.2□□□□□ -0.46
LdlrP35951 Gm44882-201ENSMUST00000205702 802 ntBASIC12.2□□□□□ -0.46
LdlrP35951 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.2□□□□□ -0.46
LdlrP35951 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.2□□□□□ -0.46
LdlrP35951 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.2□□□□□ -0.46
LdlrP35951 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms