Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.04□□□□□ -0.16
Vcam1P29533 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 Gm44551-201ENSMUST00000208804 171 ntBASIC14.04□□□□□ -0.16
Vcam1P29533 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.04□□□□□ -0.16
Vcam1P29533 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vcam1P29533 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Vcam1P29533 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.04□□□□□ -0.16
Vcam1P29533 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.04□□□□□ -0.16
Vcam1P29533 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Vcam1P29533 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcam1P29533 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vcam1P29533 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.03□□□□□ -0.16
Vcam1P29533 Gm12579-201ENSMUST00000118040 783 ntBASIC14.03□□□□□ -0.16
Vcam1P29533 Gm15573-201ENSMUST00000119487 540 ntBASIC14.03□□□□□ -0.16
Vcam1P29533 Gm13263-201ENSMUST00000121271 838 ntBASIC14.03□□□□□ -0.16
Vcam1P29533 Gm15881-201ENSMUST00000148792 942 ntBASIC14.03□□□□□ -0.16
Vcam1P29533 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vcam1P29533 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.03□□□□□ -0.16
Vcam1P29533 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.03□□□□□ -0.16
Vcam1P29533 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.03□□□□□ -0.16
Vcam1P29533 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.03□□□□□ -0.16
Vcam1P29533 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.03□□□□□ -0.16
Vcam1P29533 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vcam1P29533 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.03□□□□□ -0.16
Vcam1P29533 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.03□□□□□ -0.16
Vcam1P29533 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vcam1P29533 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.03□□□□□ -0.16
Vcam1P29533 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcam1P29533 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Vcam1P29533 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcam1P29533 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcam1P29533 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Vcam1P29533 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcam1P29533 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vcam1P29533 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcam1P29533 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vcam1P29533 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.02□□□□□ -0.16
Vcam1P29533 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.02□□□□□ -0.16
Vcam1P29533 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.02□□□□□ -0.17
Vcam1P29533 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.02□□□□□ -0.17
Vcam1P29533 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Vcam1P29533 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Gm15610-201ENSMUST00000120584 195 ntBASIC14.02□□□□□ -0.17
Vcam1P29533 Gm22144-201ENSMUST00000157402 102 ntBASIC14.02□□□□□ -0.17
Vcam1P29533 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.02□□□□□ -0.17
Vcam1P29533 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.02□□□□□ -0.17
Vcam1P29533 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.02□□□□□ -0.17
Vcam1P29533 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcam1P29533 Gm44545-201ENSMUST00000208262 746 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms