Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Clk1P22518 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clk1P22518 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.52□□□□□ -0.56
Clk1P22518 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clk1P22518 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clk1P22518 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clk1P22518 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clk1P22518 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Clk1P22518 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clk1P22518 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.52□□□□□ -0.56
Clk1P22518 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clk1P22518 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.52□□□□□ -0.57
Clk1P22518 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Clk1P22518 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.52□□□□□ -0.57
Clk1P22518 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.52□□□□□ -0.57
Clk1P22518 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.52□□□□□ -0.57
Clk1P22518 Gm24548-201ENSMUST00000158650 108 ntBASIC11.52□□□□□ -0.57
Clk1P22518 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.52□□□□□ -0.57
Clk1P22518 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Clk1P22518 Gm38092-201ENSMUST00000195600 653 ntBASIC11.52□□□□□ -0.57
Clk1P22518 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Clk1P22518 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Clk1P22518 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.52□□□□□ -0.57
Clk1P22518 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clk1P22518 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clk1P22518 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Gm11591-201ENSMUST00000120063 702 ntBASIC11.51□□□□□ -0.57
Clk1P22518 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.51□□□□□ -0.57
Clk1P22518 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.51□□□□□ -0.57
Clk1P22518 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clk1P22518 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms