Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.71□□□□□ -0.21
Tpm3P21107 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm3P21107 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tpm3P21107 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tpm3P21107 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Gm23363-201ENSMUST00000175024 79 ntBASIC13.71□□□□□ -0.21
Tpm3P21107 Gm4034-201ENSMUST00000187674 480 ntBASIC13.71□□□□□ -0.21
Tpm3P21107 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.71□□□□□ -0.21
Tpm3P21107 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.71□□□□□ -0.21
Tpm3P21107 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm3P21107 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.71□□□□□ -0.21
Tpm3P21107 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm3P21107 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm3P21107 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.71□□□□□ -0.22
Tpm3P21107 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm3P21107 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm3P21107 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm3P21107 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.71□□□□□ -0.22
Tpm3P21107 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tpm3P21107 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tpm3P21107 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tpm3P21107 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.7□□□□□ -0.22
Tpm3P21107 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.7□□□□□ -0.22
Tpm3P21107 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.7□□□□□ -0.22
Tpm3P21107 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gm37935-201ENSMUST00000192012 982 ntBASIC13.7□□□□□ -0.22
Tpm3P21107 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gm8099-201ENSMUST00000200510 742 ntBASIC13.7□□□□□ -0.22
Tpm3P21107 Gm24136-201ENSMUST00000083374 165 ntBASIC13.7□□□□□ -0.22
Tpm3P21107 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.7□□□□□ -0.22
Tpm3P21107 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tpm3P21107 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.7□□□□□ -0.22
Tpm3P21107 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tpm3P21107 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.69□□□□□ -0.22
Tpm3P21107 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tpm3P21107 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tpm3P21107 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.69□□□□□ -0.22
Tpm3P21107 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tpm3P21107 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.69□□□□□ -0.22
Tpm3P21107 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Gm15487-201ENSMUST00000122373 465 ntBASIC13.69□□□□□ -0.22
Tpm3P21107 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.69□□□□□ -0.22
Tpm3P21107 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.69□□□□□ -0.22
Tpm3P21107 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.69□□□□□ -0.22
Tpm3P21107 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.69□□□□□ -0.22
Tpm3P21107 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tpm3P21107 Gm44397-201ENSMUST00000195950 113 ntBASIC13.69□□□□□ -0.22
Tpm3P21107 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Tpm3P21107 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Tpm3P21107 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.69□□□□□ -0.22
Tpm3P21107 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tpm3P21107 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm3P21107 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms