Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
VimP20152 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VimP20152 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VimP20152 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.41□□□□□ -0.42
VimP20152 Gm14921-201ENSMUST00000118643 908 ntBASIC12.41□□□□□ -0.42
VimP20152 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.41□□□□□ -0.42
VimP20152 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.41□□□□□ -0.42
VimP20152 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
VimP20152 Gm27680-201ENSMUST00000184192 160 ntBASIC12.41□□□□□ -0.42
VimP20152 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.41□□□□□ -0.42
VimP20152 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.41□□□□□ -0.42
VimP20152 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VimP20152 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VimP20152 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
VimP20152 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VimP20152 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.4□□□□□ -0.42
VimP20152 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VimP20152 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.4□□□□□ -0.42
VimP20152 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Rgr-203ENSMUST00000225070 4704 ntBASIC12.4□□□□□ -0.42
VimP20152 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VimP20152 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.4□□□□□ -0.42
VimP20152 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VimP20152 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.4□□□□□ -0.42
VimP20152 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.4□□□□□ -0.42
VimP20152 Gm38223-201ENSMUST00000194484 695 ntBASIC12.4□□□□□ -0.42
VimP20152 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.4□□□□□ -0.42
VimP20152 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.4□□□□□ -0.42
VimP20152 Gm5279-201ENSMUST00000199575 745 ntBASIC12.4□□□□□ -0.42
VimP20152 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Gm44069-201ENSMUST00000204898 506 ntBASIC12.4□□□□□ -0.42
VimP20152 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.4□□□□□ -0.42
VimP20152 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VimP20152 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VimP20152 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VimP20152 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VimP20152 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms