Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Gm14247-201ENSMUST00000120950 237 ntBASIC10.8□□□□□ -0.68
Ccl3P10855 Gm15566-201ENSMUST00000121130 590 ntBASIC10.8□□□□□ -0.68
Ccl3P10855 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Gm9358-201ENSMUST00000183067 927 ntBASIC10.8□□□□□ -0.68
Ccl3P10855 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.8□□□□□ -0.68
Ccl3P10855 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.8□□□□□ -0.68
Ccl3P10855 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccl3P10855 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Snora73b-201ENSMUST00000083419 205 ntBASIC10.8□□□□□ -0.68
Ccl3P10855 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.8□□□□□ -0.68
Ccl3P10855 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.8□□□□□ -0.68
Ccl3P10855 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl3P10855 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl3P10855 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.79□□□□□ -0.68
Ccl3P10855 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm38210-201ENSMUST00000191944 809 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ccl3P10855 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.79□□□□□ -0.68
Ccl3P10855 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ccl3P10855 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ccl3P10855 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Ccl3P10855 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Ccl3P10855 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Gm12795-201ENSMUST00000117594 539 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Gm5419-201ENSMUST00000119301 527 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Gm11660-201ENSMUST00000120955 412 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl3P10855 Gm22138-201ENSMUST00000158748 128 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Gm8815-201ENSMUST00000173809 620 ntBASIC10.78□□□□□ -0.68
Ccl3P10855 Gm23771-201ENSMUST00000178702 110 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms