Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm45865-201ENSMUST00000211815 945 ntBASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp6P0C0A3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gm13315-201ENSMUST00000120376 991 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp6P0C0A3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Gm15703-201ENSMUST00000120250 880 ntBASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.36□□□□□ -0.27
Chmp6P0C0A3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp6P0C0A3 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms