Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
NclP09405 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC18.19■□□□□ 0.5
NclP09405 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NclP09405 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC18.18■□□□□ 0.5
NclP09405 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC18.18■□□□□ 0.5
NclP09405 Gm18038-201ENSMUST00000197900 485 ntBASIC18.18■□□□□ 0.5
NclP09405 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
NclP09405 Gm17827-201ENSMUST00000211825 742 ntBASIC18.18■□□□□ 0.5
NclP09405 AC169036.1-201ENSMUST00000227994 296 ntBASIC18.18■□□□□ 0.5
NclP09405 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC18.18■□□□□ 0.5
NclP09405 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NclP09405 Gm5847-201ENSMUST00000178959 1595 ntBASIC18.17■□□□□ 0.5
NclP09405 Mypopos-202ENSMUST00000205975 2321 ntBASIC18.17■□□□□ 0.5
NclP09405 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NclP09405 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NclP09405 Gm6039-201ENSMUST00000121667 1250 ntBASIC18.17■□□□□ 0.5
NclP09405 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.17■□□□□ 0.5
NclP09405 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NclP09405 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC18.17■□□□□ 0.5
NclP09405 Rprl1-201ENSMUST00000158050 327 ntBASIC18.17■□□□□ 0.5
NclP09405 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC18.17■□□□□ 0.5
NclP09405 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Gm42997-202ENSMUST00000200321 985 ntBASIC18.17■□□□□ 0.5
NclP09405 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NclP09405 Gm7848-201ENSMUST00000210739 718 ntBASIC18.17■□□□□ 0.5
NclP09405 Gm5455-201ENSMUST00000058710 715 ntBASIC18.17■□□□□ 0.5
NclP09405 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NclP09405 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NclP09405 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NclP09405 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Rnf17-202ENSMUST00000223627 2077 ntBASIC18.16■□□□□ 0.5
NclP09405 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Gm11331-201ENSMUST00000119764 288 ntBASIC18.16■□□□□ 0.5
NclP09405 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NclP09405 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
NclP09405 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC18.16■□□□□ 0.5
NclP09405 Gm18711-201ENSMUST00000199341 750 ntBASIC18.16■□□□□ 0.5
NclP09405 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC18.16■□□□□ 0.5
NclP09405 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NclP09405 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NclP09405 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NclP09405 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NclP09405 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NclP09405 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
NclP09405 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC18.16■□□□□ 0.5
NclP09405 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NclP09405 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NclP09405 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC18.15■□□□□ 0.5
NclP09405 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms