Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna1P04756 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna1P04756 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chrna1P04756 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Chrna1P04756 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chrna1P04756 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chrna1P04756 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.14□□□□□ -0.31
Chrna1P04756 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Gm5523-201ENSMUST00000180415 997 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.14□□□□□ -0.31
Chrna1P04756 Gm37246-201ENSMUST00000192665 835 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 Gm43184-201ENSMUST00000197247 542 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 Gm45118-201ENSMUST00000208928 825 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 Gm4157-201ENSMUST00000211647 679 ntBASIC13.14□□□□□ -0.31
Chrna1P04756 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.14□□□□□ -0.31
Chrna1P04756 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna1P04756 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna1P04756 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Gm23251-201ENSMUST00000103773 110 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Gm7851-201ENSMUST00000117574 323 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Gm12857-201ENSMUST00000117678 592 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Gm12501-201ENSMUST00000119163 529 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.13□□□□□ -0.31
Chrna1P04756 Mir3547-201ENSMUST00000175461 88 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.13□□□□□ -0.31
Chrna1P04756 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.13□□□□□ -0.31
Chrna1P04756 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Chrna1P04756 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Chrna1P04756 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Chrna1P04756 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.13□□□□□ -0.31
Chrna1P04756 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chrna1P04756 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.13□□□□□ -0.31
Chrna1P04756 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.12□□□□□ -0.31
Chrna1P04756 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.12□□□□□ -0.31
Chrna1P04756 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.12□□□□□ -0.31
Chrna1P04756 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chrna1P04756 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Chrna1P04756 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms