Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04224 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.77□□□□□ -0.68
P04224 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04224 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04224 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04224 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P04224 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04224 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
P04224 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
P04224 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
P04224 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.77□□□□□ -0.69
P04224 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.77□□□□□ -0.69
P04224 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Gm22189-201ENSMUST00000103822 86 ntBASIC10.77□□□□□ -0.69
P04224 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.77□□□□□ -0.69
P04224 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.77□□□□□ -0.69
P04224 Gm42612-201ENSMUST00000197986 623 ntBASIC10.77□□□□□ -0.69
P04224 Gm43170-201ENSMUST00000199827 612 ntBASIC10.77□□□□□ -0.69
P04224 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Gm19220-201ENSMUST00000222682 803 ntBASIC10.77□□□□□ -0.69
P04224 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
P04224 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
P04224 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
P04224 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.77□□□□□ -0.69
P04224 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
P04224 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P04224 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04224 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.77□□□□□ -0.69
P04224 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
P04224 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
P04224 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.76□□□□□ -0.69
P04224 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
P04224 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
P04224 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.76□□□□□ -0.69
P04224 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.76□□□□□ -0.69
P04224 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
P04224 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
P04224 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
P04224 Gm44872-201ENSMUST00000207864 420 ntBASIC10.76□□□□□ -0.69
P04224 Gm5867-201ENSMUST00000063197 592 ntBASIC10.76□□□□□ -0.69
P04224 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.76□□□□□ -0.69
P04224 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
P04224 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
P04224 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.76□□□□□ -0.69
P04224 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04224 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
P04224 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
P04224 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04224 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms