Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.31□□□□□ -0.76
Hoxa3P02831 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.31□□□□□ -0.76
Hoxa3P02831 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Mir3102-201ENSMUST00000175555 104 ntBASIC10.31□□□□□ -0.76
Hoxa3P02831 Mir7070-201ENSMUST00000183657 86 ntBASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.31□□□□□ -0.76
Hoxa3P02831 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.31□□□□□ -0.76
Hoxa3P02831 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Hoxa3P02831 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Hoxa3P02831 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm14017-201ENSMUST00000121934 386 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Hoxa3P02831 Gm24990-201ENSMUST00000157406 323 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.3□□□□□ -0.76
Hoxa3P02831 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.3□□□□□ -0.76
Hoxa3P02831 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms