Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Col4a1P02463 Gm29155-201ENSMUST00000185910 269 ntBASIC14.77□□□□□ -0.05
Col4a1P02463 Gm17877-201ENSMUST00000192578 814 ntBASIC14.77□□□□□ -0.05
Col4a1P02463 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.77□□□□□ -0.05
Col4a1P02463 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.77□□□□□ -0.05
Col4a1P02463 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Col4a1P02463 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col4a1P02463 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col4a1P02463 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.76□□□□□ -0.05
Col4a1P02463 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.76□□□□□ -0.05
Col4a1P02463 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.76□□□□□ -0.05
Col4a1P02463 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.76□□□□□ -0.05
Col4a1P02463 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col4a1P02463 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.76□□□□□ -0.05
Col4a1P02463 Gm2553-201ENSMUST00000215986 605 ntBASIC14.76□□□□□ -0.05
Col4a1P02463 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Col4a1P02463 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col4a1P02463 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col4a1P02463 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col4a1P02463 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Col4a1P02463 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Gm14942-201ENSMUST00000119642 336 ntBASIC14.75□□□□□ -0.05
Col4a1P02463 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.75□□□□□ -0.05
Col4a1P02463 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Gm20495-201ENSMUST00000173902 235 ntBASIC14.75□□□□□ -0.05
Col4a1P02463 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.75□□□□□ -0.05
Col4a1P02463 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.75□□□□□ -0.05
Col4a1P02463 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.75□□□□□ -0.05
Col4a1P02463 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.75□□□□□ -0.05
Col4a1P02463 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Col4a1P02463 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col4a1P02463 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.75□□□□□ -0.05
Col4a1P02463 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.75□□□□□ -0.05
Col4a1P02463 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.75□□□□□ -0.05
Col4a1P02463 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col4a1P02463 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Col4a1P02463 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm26013-201ENSMUST00000104404 119 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.74□□□□□ -0.05
Col4a1P02463 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.74□□□□□ -0.05
Col4a1P02463 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Gm45120-201ENSMUST00000208880 408 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Gm45594-201ENSMUST00000211717 241 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Gm18968-201ENSMUST00000221319 862 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.74□□□□□ -0.05
Col4a1P02463 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a1P02463 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms