Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
IghmP01872 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
IghmP01872 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
IghmP01872 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
IghmP01872 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
IghmP01872 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.47□□□□□ -0.57
IghmP01872 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.47□□□□□ -0.57
IghmP01872 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.47□□□□□ -0.57
IghmP01872 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
IghmP01872 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.46□□□□□ -0.57
IghmP01872 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.46□□□□□ -0.57
IghmP01872 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
IghmP01872 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
IghmP01872 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
IghmP01872 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Gm6023-201ENSMUST00000118217 606 ntBASIC11.46□□□□□ -0.57
IghmP01872 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.46□□□□□ -0.57
IghmP01872 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
IghmP01872 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.46□□□□□ -0.57
IghmP01872 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.46□□□□□ -0.57
IghmP01872 Gm25043-201ENSMUST00000158604 212 ntBASIC11.46□□□□□ -0.57
IghmP01872 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.46□□□□□ -0.57
IghmP01872 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.46□□□□□ -0.57
IghmP01872 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.46□□□□□ -0.57
IghmP01872 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.46□□□□□ -0.57
IghmP01872 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
IghmP01872 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.46□□□□□ -0.58
IghmP01872 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
IghmP01872 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.46□□□□□ -0.58
IghmP01872 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.46□□□□□ -0.58
IghmP01872 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
IghmP01872 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.45□□□□□ -0.58
IghmP01872 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.45□□□□□ -0.58
IghmP01872 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.45□□□□□ -0.58
IghmP01872 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
IghmP01872 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
IghmP01872 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.45□□□□□ -0.58
IghmP01872 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.45□□□□□ -0.58
IghmP01872 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
IghmP01872 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
IghmP01872 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.45□□□□□ -0.58
IghmP01872 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Gm14247-201ENSMUST00000120950 237 ntBASIC11.45□□□□□ -0.58
IghmP01872 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
IghmP01872 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms