Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm23984-201ENSMUST00000157139 203 ntBASIC11.32□□□□□ -0.6
Cops4O88544 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.32□□□□□ -0.6
Cops4O88544 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.32□□□□□ -0.6
Cops4O88544 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.32□□□□□ -0.6
Cops4O88544 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.32□□□□□ -0.6
Cops4O88544 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.32□□□□□ -0.6
Cops4O88544 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cops4O88544 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cops4O88544 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.31□□□□□ -0.6
Cops4O88544 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.31□□□□□ -0.6
Cops4O88544 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cops4O88544 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Cops4O88544 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Gm11618-201ENSMUST00000117946 267 ntBASIC11.31□□□□□ -0.6
Cops4O88544 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.31□□□□□ -0.6
Cops4O88544 Gm8463-201ENSMUST00000208573 613 ntBASIC11.31□□□□□ -0.6
Cops4O88544 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cops4O88544 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cops4O88544 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.3□□□□□ -0.6
Cops4O88544 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cops4O88544 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cops4O88544 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Gm11918-201ENSMUST00000121660 179 ntBASIC11.3□□□□□ -0.6
Cops4O88544 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.3□□□□□ -0.6
Cops4O88544 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms