Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Ubr1O70481 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.61■□□□□ 0.09
Ubr1O70481 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.61■□□□□ 0.09
Ubr1O70481 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.61■□□□□ 0.09
Ubr1O70481 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ubr1O70481 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.61■□□□□ 0.09
Ubr1O70481 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Ubr1O70481 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Gm26013-201ENSMUST00000104404 119 ntBASIC15.6■□□□□ 0.09
Ubr1O70481 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.6■□□□□ 0.09
Ubr1O70481 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.6■□□□□ 0.09
Ubr1O70481 Gm21778-201ENSMUST00000178779 471 ntBASIC15.6■□□□□ 0.09
Ubr1O70481 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC15.6■□□□□ 0.09
Ubr1O70481 Gm29410-201ENSMUST00000188383 694 ntBASIC15.6■□□□□ 0.09
Ubr1O70481 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.6■□□□□ 0.09
Ubr1O70481 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.6■□□□□ 0.09
Ubr1O70481 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Ubr1O70481 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ubr1O70481 Gm8899-201ENSMUST00000214635 1332 ntBASIC15.6■□□□□ 0.09
Ubr1O70481 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ubr1O70481 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.6■□□□□ 0.09
Ubr1O70481 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ubr1O70481 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ubr1O70481 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC15.59■□□□□ 0.09
Ubr1O70481 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Ubr1O70481 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.59■□□□□ 0.09
Ubr1O70481 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Ubr1O70481 Gm23218-201ENSMUST00000158124 276 ntBASIC15.59■□□□□ 0.09
Ubr1O70481 Gm8531-201ENSMUST00000188319 893 ntBASIC15.59■□□□□ 0.09
Ubr1O70481 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ubr1O70481 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Gm25766-201ENSMUST00000104101 131 ntBASIC15.59■□□□□ 0.09
Ubr1O70481 Gm16397-201ENSMUST00000122201 494 ntBASIC15.59■□□□□ 0.09
Ubr1O70481 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC15.59■□□□□ 0.09
Ubr1O70481 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.59■□□□□ 0.09
Ubr1O70481 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ubr1O70481 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ubr1O70481 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ubr1O70481 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.58■□□□□ 0.09
Ubr1O70481 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ubr1O70481 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ubr1O70481 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ubr1O70481 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
Ubr1O70481 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Gm9089-201ENSMUST00000122027 526 ntBASIC15.58■□□□□ 0.08
Ubr1O70481 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.58■□□□□ 0.08
Ubr1O70481 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ubr1O70481 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ubr1O70481 Gm18642-201ENSMUST00000206642 1400 ntBASIC15.58■□□□□ 0.08
Ubr1O70481 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ubr1O70481 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms