Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Npc1O35604 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Npc1O35604 Gm15808-201ENSMUST00000119046 604 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Gm14832-201ENSMUST00000121289 322 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.98□□□□□ -0.49
Npc1O35604 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Gm18304-201ENSMUST00000189162 546 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Gm38241-201ENSMUST00000192641 898 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm44958-201ENSMUST00000203734 736 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Gm39404-201ENSMUST00000216350 313 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Gm26035-201ENSMUST00000083065 308 ntBASIC11.98□□□□□ -0.49
Npc1O35604 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Npc1O35604 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.98□□□□□ -0.49
Npc1O35604 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Npc1O35604 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npc1O35604 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.97□□□□□ -0.49
Npc1O35604 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.97□□□□□ -0.49
Npc1O35604 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.97□□□□□ -0.49
Npc1O35604 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Gm12015-201ENSMUST00000117065 843 ntBASIC11.97□□□□□ -0.49
Npc1O35604 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.97□□□□□ -0.49
Npc1O35604 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 AA914427-201ENSMUST00000193194 1166 ntBASIC11.97□□□□□ -0.49
Npc1O35604 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.97□□□□□ -0.49
Npc1O35604 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.97□□□□□ -0.49
Npc1O35604 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.97□□□□□ -0.49
Npc1O35604 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.97□□□□□ -0.49
Npc1O35604 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.97□□□□□ -0.49
Npc1O35604 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Npc1O35604 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.97□□□□□ -0.49
Npc1O35604 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Npc1O35604 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.97□□□□□ -0.49
Npc1O35604 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms