Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AlyrefO08583 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm26368-201ENSMUST00000157826 118 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
AlyrefO08583 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm28388-201ENSMUST00000186262 437 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm5733-201ENSMUST00000190232 939 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Gm38092-201ENSMUST00000195600 653 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Gm4482-201ENSMUST00000200876 742 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.5□□□□□ -0.41
AlyrefO08583 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.5□□□□□ -0.41
AlyrefO08583 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
AlyrefO08583 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
AlyrefO08583 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.5□□□□□ -0.41
AlyrefO08583 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AlyrefO08583 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.5□□□□□ -0.41
AlyrefO08583 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AlyrefO08583 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.49□□□□□ -0.41
AlyrefO08583 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.49□□□□□ -0.41
AlyrefO08583 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Gm18201-201ENSMUST00000174735 875 ntBASIC12.49□□□□□ -0.41
AlyrefO08583 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.49□□□□□ -0.41
AlyrefO08583 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.49□□□□□ -0.41
AlyrefO08583 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.49□□□□□ -0.41
AlyrefO08583 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.49□□□□□ -0.41
AlyrefO08583 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AlyrefO08583 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
AlyrefO08583 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AlyrefO08583 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms