Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
MsmbO08540 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Gm14109-201ENSMUST00000118814 309 ntBASIC9.44□□□□□ -0.9
MsmbO08540 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
MsmbO08540 Gm18753-201ENSMUST00000201000 566 ntBASIC9.44□□□□□ -0.9
MsmbO08540 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.44□□□□□ -0.9
MsmbO08540 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.44□□□□□ -0.9
MsmbO08540 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.44□□□□□ -0.9
MsmbO08540 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
MsmbO08540 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
MsmbO08540 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
MsmbO08540 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.44□□□□□ -0.9
MsmbO08540 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.44□□□□□ -0.9
MsmbO08540 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MsmbO08540 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.43□□□□□ -0.9
MsmbO08540 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
MsmbO08540 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
MsmbO08540 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm24830-201ENSMUST00000102024 166 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
MsmbO08540 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Gm25668-201ENSMUST00000157700 129 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm23119-201ENSMUST00000158610 140 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm25890-201ENSMUST00000177643 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm25700-201ENSMUST00000177693 110 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm22614-201ENSMUST00000178300 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.43□□□□□ -0.9
MsmbO08540 AA914427-201ENSMUST00000193194 1166 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm38317-201ENSMUST00000195564 343 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
MsmbO08540 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
MsmbO08540 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
MsmbO08540 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.43□□□□□ -0.9
MsmbO08540 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.43□□□□□ -0.9
MsmbO08540 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
MsmbO08540 Gm10312-201ENSMUST00000078515 489 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm22042-201ENSMUST00000082989 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm26232-201ENSMUST00000083360 166 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm24136-201ENSMUST00000083374 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Gm26110-201ENSMUST00000083971 165 ntBASIC9.43□□□□□ -0.9
MsmbO08540 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.43□□□□□ -0.9
MsmbO08540 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms