Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm28388-201ENSMUST00000186262 437 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm4034-201ENSMUST00000187674 480 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm37458-201ENSMUST00000194055 410 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm43852-201ENSMUST00000202098 917 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm6108-201ENSMUST00000208365 367 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.65□□□□□ -0.22
B020004C17RikJ3QP07 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
B020004C17RikJ3QP07 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm25880-201ENSMUST00000104331 132 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm11340-201ENSMUST00000119226 412 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm3793-201ENSMUST00000204973 672 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm19091-201ENSMUST00000208120 978 ntBASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
B020004C17RikJ3QP07 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm26013-201ENSMUST00000104404 119 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm6407-201ENSMUST00000176468 549 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm12407-201ENSMUST00000180219 324 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm17877-201ENSMUST00000192578 814 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms