Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shisa8J3QNX5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm12384-201ENSMUST00000119228 919 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm11803-201ENSMUST00000119966 444 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm38092-201ENSMUST00000195600 653 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm44882-201ENSMUST00000205702 802 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm10146-201ENSMUST00000072739 309 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm2423-201ENSMUST00000074863 733 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Shisa8J3QNX5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm12203-201ENSMUST00000118235 598 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm12209-201ENSMUST00000120089 596 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm14057-201ENSMUST00000120631 482 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm10156-201ENSMUST00000122364 462 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm27243-201ENSMUST00000183964 521 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms