Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
TprF6ZDS4 Gm23771-201ENSMUST00000178702 110 ntBASIC11.3□□□□□ -0.6
TprF6ZDS4 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
TprF6ZDS4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.3□□□□□ -0.6
TprF6ZDS4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
TprF6ZDS4 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.3□□□□□ -0.6
TprF6ZDS4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.3□□□□□ -0.6
TprF6ZDS4 Ginm1-202ENSMUST00000065124 300 ntBASIC11.3□□□□□ -0.6
TprF6ZDS4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
TprF6ZDS4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
TprF6ZDS4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.3□□□□□ -0.6
TprF6ZDS4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TprF6ZDS4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TprF6ZDS4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.29□□□□□ -0.6
TprF6ZDS4 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Mir6998-201ENSMUST00000183343 64 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
TprF6ZDS4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm42937-201ENSMUST00000197360 752 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.29□□□□□ -0.6
TprF6ZDS4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.29□□□□□ -0.6
TprF6ZDS4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TprF6ZDS4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.28□□□□□ -0.6
TprF6ZDS4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.28□□□□□ -0.6
TprF6ZDS4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TprF6ZDS4 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.28□□□□□ -0.6
TprF6ZDS4 Gm15573-201ENSMUST00000119487 540 ntBASIC11.28□□□□□ -0.6
TprF6ZDS4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms