Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Gm14058-201ENSMUST00000116082 735 ntBASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Gm6963-201ENSMUST00000147879 379 ntBASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Mir7076-201ENSMUST00000183519 74 ntBASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syngap1F6SEU4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Gm15515-201ENSMUST00000117827 822 ntBASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Gm12380-201ENSMUST00000119012 544 ntBASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Gm12899-201ENSMUST00000120565 551 ntBASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.8□□□□□ -0.2
Syngap1F6SEU4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Gm32999-201ENSMUST00000192693 562 ntBASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syngap1F6SEU4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Gm28882-201ENSMUST00000185504 314 ntBASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.78□□□□□ -0.2
Syngap1F6SEU4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms