Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Srp54bE9PXC0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm22133-201ENSMUST00000102082 109 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm12176-201ENSMUST00000121420 875 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm18734-201ENSMUST00000172937 808 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm7848-201ENSMUST00000210739 718 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm26035-201ENSMUST00000083065 308 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Srp54bE9PXC0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm14263-201ENSMUST00000117955 746 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm20426-201ENSMUST00000173657 440 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm43947-201ENSMUST00000203019 959 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm43962-201ENSMUST00000203898 190 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm8959-201ENSMUST00000213150 571 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Srp54bE9PXC0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms