Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm22495-201ENSMUST00000104492 126 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm12499-201ENSMUST00000121961 546 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Capsl-202ENSMUST00000226688 739 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm22662-201ENSMUST00000175290 256 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm42687-201ENSMUST00000199075 164 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a3E9PWQ3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm7940-201ENSMUST00000218195 769 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm16477-201ENSMUST00000085365 801 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm17415-201ENSMUST00000096427 789 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm23647-201ENSMUST00000175042 109 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Rn5s-201ENSMUST00000177555 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm22109-201ENSMUST00000177995 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm22291-201ENSMUST00000178027 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 Gm23284-201ENSMUST00000178069 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.85□□□□□ -0.51
Col6a3E9PWQ3 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms