Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Gm28071-201ENSMUST00000190355 478 ntBASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Gm43184-201ENSMUST00000197247 542 ntBASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Scn8aQ9WTU3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Gm23596-201ENSMUST00000104304 132 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Gm7851-201ENSMUST00000117574 323 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Mir3547-201ENSMUST00000175461 88 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Mir6546-201ENSMUST00000184460 62 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.25□□□□□ -0.45
Scn8aQ9WTU3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms