Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm43118-201ENSMUST00000199149 775 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a2Q9JLR1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.08□□□□□ -0.63
Sec61a2Q9JLR1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm9630-201ENSMUST00000178304 885 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a2Q9JLR1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms