Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.44□□□□□ -0.58
Cdc40Q9DC48 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdc40Q9DC48 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm23270-201ENSMUST00000104055 131 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm12997-201ENSMUST00000120207 640 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Mir3102-201ENSMUST00000175555 104 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm5363-201ENSMUST00000211927 938 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Daam2-202ENSMUST00000224595 1926 ntBASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdc40Q9DC48 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdc40Q9DC48 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms