Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3bl1Q9D701 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm14701-201ENSMUST00000117156 348 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm4875-201ENSMUST00000118257 786 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm5312-201ENSMUST00000203728 547 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Gm42479-201ENSMUST00000198654 1356 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 AC140393.3-201ENSMUST00000228396 1352 ntBASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3bl1Q9D701 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Upk3bl1Q9D701 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm26736-201ENSMUST00000180425 1236 ntBASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm42516-201ENSMUST00000198691 767 ntBASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm8190-201ENSMUST00000199603 586 ntBASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3bl1Q9D701 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms