Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7Q9D541 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gm14832-201ENSMUST00000121289 322 ntBASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gm11424-201ENSMUST00000121929 829 ntBASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gm28882-201ENSMUST00000185504 314 ntBASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.33□□□□□ -0.12
Ccdc7Q9D541 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7Q9D541 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Rprl1-201ENSMUST00000158050 327 ntBASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Gm19994-201ENSMUST00000217086 586 ntBASIC14.32□□□□□ -0.12
Ccdc7Q9D541 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7Q9D541 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc7Q9D541 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms