Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm14760-201ENSMUST00000121831 999 ntBASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm38317-201ENSMUST00000195564 343 ntBASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm44124-201ENSMUST00000204159 472 ntBASIC12.61□□□□□ -0.39
Vps28Q9D1C8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Matn2-203ENSMUST00000226766 3252 ntBASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 AA914427-201ENSMUST00000193194 1166 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Gm42937-201ENSMUST00000197360 752 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Gm44958-201ENSMUST00000203734 736 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Gm44967-201ENSMUST00000207047 631 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps28Q9D1C8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm9083-201ENSMUST00000120423 819 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm8885-201ENSMUST00000189382 598 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps28Q9D1C8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms