Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.61□□□□□ -0.55
Upk1aQ9D132 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.61□□□□□ -0.55
Upk1aQ9D132 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Gm27892-201ENSMUST00000185017 106 ntBASIC11.61□□□□□ -0.55
Upk1aQ9D132 Gm4768-201ENSMUST00000206199 686 ntBASIC11.61□□□□□ -0.55
Upk1aQ9D132 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.61□□□□□ -0.55
Upk1aQ9D132 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk1aQ9D132 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.6□□□□□ -0.55
Upk1aQ9D132 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Gm22331-201ENSMUST00000158066 136 ntBASIC11.6□□□□□ -0.55
Upk1aQ9D132 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Gm19163-201ENSMUST00000223313 780 ntBASIC11.6□□□□□ -0.55
Upk1aQ9D132 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk1aQ9D132 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Upk1aQ9D132 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.59□□□□□ -0.55
Upk1aQ9D132 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Upk1aQ9D132 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms