Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim13Q9CYB0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm37917-201ENSMUST00000194711 392 ntBASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim13Q9CYB0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.35□□□□□ -0.59
Trim13Q9CYB0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm8805-201ENSMUST00000117848 313 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm13123-201ENSMUST00000122173 492 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm22121-201ENSMUST00000175148 54 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm45668-201ENSMUST00000211271 493 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm18624-201ENSMUST00000220966 658 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim13Q9CYB0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms