Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1aQ9CU62 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smc1aQ9CU62 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Gm17208-201ENSMUST00000168388 535 ntBASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Gm8738-201ENSMUST00000172606 329 ntBASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Mir7070-201ENSMUST00000183657 86 ntBASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Smc1aQ9CU62 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.76□□□□□ -0.21
Smc1aQ9CU62 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smc1aQ9CU62 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1aQ9CU62 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc1aQ9CU62 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1aQ9CU62 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1aQ9CU62 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms