Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.11■□□□□ 0.01
Trim34aQ99PP6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim34aQ99PP6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm15782-201ENSMUST00000121073 445 ntBASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm12164-201ENSMUST00000121695 551 ntBASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm15881-201ENSMUST00000148792 942 ntBASIC15.1■□□□□ 0.01
Trim34aQ99PP6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Gm5705-201ENSMUST00000066241 711 ntBASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim34aQ99PP6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Gm11663-201ENSMUST00000117888 290 ntBASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Gm9797-202ENSMUST00000218003 294 ntBASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim34aQ99PP6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms