Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm11949-201ENSMUST00000117640 372 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm16071-201ENSMUST00000119589 793 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm14247-201ENSMUST00000120950 237 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm15566-201ENSMUST00000121130 590 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Mir6998-201ENSMUST00000183343 64 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm17826-201ENSMUST00000189720 798 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm43520-201ENSMUST00000197996 164 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.94□□□□□ -0.34
Clp1Q99LI9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clp1Q99LI9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.93□□□□□ -0.34
Clp1Q99LI9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm14193-201ENSMUST00000105067 153 ntBASIC12.93□□□□□ -0.34
Clp1Q99LI9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.93□□□□□ -0.34
Clp1Q99LI9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clp1Q99LI9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.92□□□□□ -0.34
Clp1Q99LI9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clp1Q99LI9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms