Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC19.12■□□□□ 0.65
Clip1Q922J3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
Clip1Q922J3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Clip1Q922J3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clip1Q922J3 Gm38385-201ENSMUST00000194454 2351 ntBASIC19.12■□□□□ 0.65
Clip1Q922J3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC19.11■□□□□ 0.65
Clip1Q922J3 Gm11660-201ENSMUST00000120955 412 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 Gm7666-201ENSMUST00000146631 819 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC19.11■□□□□ 0.65
Clip1Q922J3 Gm5706-201ENSMUST00000181525 993 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 Mir8115-201ENSMUST00000184992 119 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Gm9132-201ENSMUST00000210182 832 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 Gm18974-201ENSMUST00000221478 1031 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 AC134860.1-201ENSMUST00000224867 660 ntBASIC19.11■□□□□ 0.65
Clip1Q922J3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC19.11■□□□□ 0.65
Clip1Q922J3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC19.11■□□□□ 0.65
Clip1Q922J3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip1Q922J3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Gm8731-201ENSMUST00000118088 412 ntBASIC19.1■□□□□ 0.65
Clip1Q922J3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC19.1■□□□□ 0.65
Clip1Q922J3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC19.1■□□□□ 0.65
Clip1Q922J3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC19.1■□□□□ 0.65
Clip1Q922J3 Gm6867-201ENSMUST00000219165 425 ntBASIC19.1■□□□□ 0.65
Clip1Q922J3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC19.1■□□□□ 0.65
Clip1Q922J3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip1Q922J3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC19.1■□□□□ 0.65
Clip1Q922J3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clip1Q922J3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm37019-201ENSMUST00000192133 2134 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm43364-201ENSMUST00000196046 3274 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm4726-201ENSMUST00000135604 736 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm6019-201ENSMUST00000148369 736 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm17931-201ENSMUST00000208132 634 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Gm13910-201ENSMUST00000121752 1428 ntBASIC19.09■□□□□ 0.65
Clip1Q922J3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip1Q922J3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC19.09■□□□□ 0.65
Clip1Q922J3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Clip1Q922J3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms