Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb1Q91Y08 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm15370-201ENSMUST00000117158 253 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm35960-201ENSMUST00000202712 767 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Gm18935-201ENSMUST00000212692 664 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb1Q91Y08 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Map1b-203ENSMUST00000223725 2669 ntBASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb1Q91Y08 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms