Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm23931-201ENSMUST00000103842 109 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm14807-201ENSMUST00000116640 983 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gm44213-201ENSMUST00000204977 703 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 AC144733.1-201ENSMUST00000222893 1289 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb17Q91VD8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm13754-201ENSMUST00000120486 998 ntBASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm36994-201ENSMUST00000192941 492 ntBASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm37987-201ENSMUST00000194999 825 ntBASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm7631-201ENSMUST00000196935 1100 ntBASIC13.37□□□□□ -0.27
Pcdhb17Q91VD8 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms