Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm14921-201ENSMUST00000118643 908 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm25072-201ENSMUST00000175233 235 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm5733-201ENSMUST00000190232 939 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm42937-201ENSMUST00000197360 752 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm18038-201ENSMUST00000197900 485 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Mir7686-201ENSMUST00000200604 57 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vsx1Q91V10 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.17□□□□□ -0.46
Vsx1Q91V10 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx1Q91V10 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm27530-201ENSMUST00000184096 98 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.16□□□□□ -0.46
Vsx1Q91V10 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx1Q91V10 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx1Q91V10 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms